STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stu0423Conserved hypothetical protein, degV family, truncated; Truncated. (212 aa)    
Predicted Functional Partners:
stu1875
Conserved hypothetical protein.
 
 
 0.908
stu0421
Conserved hypothetical protein.
  
    0.804
stu1212
Conserved hypothetical protein, degV family.
 
     0.774
stu0422
Conserved hypothetical protein, degV family, truncated; Truncated.
       0.773
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
       0.639
papL
tRNA nucleotidyltransferase/poly(A) polymerase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate.
       0.639
asp
Alkaline-shock protein.
 
    0.613
stu0426
ABC transporter, drug resistance ATPase-1 (Drug RA1) family, ATP binding protein.
     
 0.527
rex
Conserved hypothetical protein, putative DNA-binding protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
  
   
 0.452
stu0419
Acetyltransferase, GNAT family, truncated; Truncated.
       0.443
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.