Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lmrA1Multidrug ABC exporter (DrugE2) family, ATP binding/membrane-spanning protein. (604 aa)    
Predicted Functional Partners:
lmrA2
Multidrug ABC exporter (DrugE2) family, ATP binding/membrane-spanning protein.
 
  
0.902
stu0432
Transcriptional regulator, MarR family.
 
  
 0.838
stu1334
Peptide-4 ABC exporter (Pep4E) family, ATP binding protein.
    
0.727
stu0539
Lipid/multidrug/protein-type ABC exporter, ATP binding/membrane-spanning protein.
 
  
0.589
stu0759
Lipid/multidrug/protein-type ABC exporter, ATP binding/membrane-spanning protein.
 
  
0.585
stu1411
ABC transporter, truncated; Truncated.
 
  
0.569
stu1693
Lipid/multidrug/protein-type ABC exporter, ATP binding/membrane-spanning protein.
 
  
0.567
stu1694
Lipid/multidrug/protein-type ABC exporter, ATP binding/membrane-spanning protein.
 
  
0.550
stu0324
Peptide-2 ABC exporter (Pep2E) family, ATP binding/membrane-spanning protein.
 
  
0.532
gnlQ
Glutamine ABC uptake transporter ATP-binding protein.
 
     
0.511
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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