Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
stu0437Sensor histidine kinase, uncoupled, truncated; Truncated. (238 aa)    
Predicted Functional Partners:
stu0792
Response regulator (homolog to ciaR Spn), truncated; Truncated.
 
 
 0.994
acoL
Acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase.
    
 0.906
rr01
Response regulator (homolog to csrR/covR Spy).
 
 
 0.641
stu1381
Response regulator (homolog to RR08 Spn) uncoupled, truncated; Truncated.
 
 
 0.621
stu1380
Response regulator (homolog to RR08 Spn) uncoupled, truncated; Truncated.
 
 
 0.619
rr04
Response regulator (homolog to spaR Bsu & DvnR Cdi).
 
 
 0.606
rr05
Response regulator (homolog to RR02/MicA Spn & RR02 Sth &VicR Spy).
 
 
 0.606
rr07
Response regulator (homolog to RR01Spn & Sth).
  
 
 0.552
stu1185
Proteinase.
  
     0.540
pps
Non-ribosomal peptide synthetase.
 
 
 0.528
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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