Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
stu0441Conserved hypothetical protein; Belongs to the UPF0346 family. (71 aa)    
Predicted Functional Partners:
stu0440
Conserved hypothetical protein; Belongs to the CvfB family.
     
 0.860
rrf
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
       0.768
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
       0.753
stu1211
Conserved hypothetical protein.
 
  
 0.749
stu1210
Conserved hypothetical protein.
 
   
 0.700
stu1141
Conserved hypothetical protein, TPR domain protein.
 
     0.699
stu0727
Conserved hypothetical protein.
  
   
 0.640
stu1773
Conserved hypothetical protein; Belongs to the UPF0356 family.
  
   
 0.600
mecA
Negative regulator of genetic competence, putative; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.
  
     0.569
phoH
Phosphate starvation-induced protein.
       0.537
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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