Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
stu0446Surface immunogenic protein, truncated; Truncated. (171 aa)    
Predicted Functional Partners:
cse
Cell segregation protein.
  
 0.741
phoH
Phosphate starvation-induced protein.
  
    0.591
bta
Bacteriocin transport accessory protein, putative.
  
     0.558
dnaQ
DNA polymerase III epsilon subunit.
  
     0.525
copZ
Putative copper chaperone - Cu2+-Cu+-Ag+-P-type ATPase.
  
     0.465
stu0892
Transcriptional regulator.
  
     0.441
labC
Lantibiotic biosynthesis protein.
  
     0.423
mutT
7,8-dihydro-8-oxoguanine-triphosphatase.
  
     0.419
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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