Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
stu0508Conserved hypothetical protein. (85 aa)    
Predicted Functional Partners:
glyS
glycyl-tRNA synthetase beta subunit.
       0.844
stu1961
Conserved hypothetical protein; Belongs to the UPF0473 family.
  
  
 0.754
stu0342
Conserved hypothetical protein.
  
   
 0.731
glyQ
glycyl-tRNA synthetase alpha subunit.
       0.670
stu0634
Conserved hypothetical protein.
      
 0.666
stu1459
GTP pyrophosphokinase, putative.
  
     0.552
cycA
D-Serine/D-alanine/glycine:H+ symporter.
       0.493
divIB
Cell division protein; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
     0.479
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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