Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
stu0513Beta-glucoside PTS system component IIABC, truncated; Truncated. (238 aa)    
Predicted Functional Partners:
stu0512
Beta-glucoside PTS system component IIABC, truncated; Truncated.
 
 0.999
stu0514
Beta-glucoside PTS system component IIABC, truncated; Truncated.
 
 0.999
stu1889
Trehalose PTS trehalose component IIBC, truncated; Truncated.
 
 
 0.978
stu1890
Trehalose PTS trehalose component IIBC, truncated; Truncated.
 
 
 0.966
scrA
Sucrose PTS component II.
 
 
0.964
stu0192
Glucose PTS enzyme component IIABC, truncated; Truncated.
 
 0.963
stu0189
Glucose PTS enzyme component IIABC, truncated; Truncated.
  
 
 0.951
stu0190
Glucose PTS enzyme component IIABC, truncated; Truncated.
  
 
 0.951
stu0511
Beta-glucoside PTS system component IIABC, truncated; Truncated.
 
 
 0.928
stu0401
Fructose PTS system component IIABC, truncated; Truncated.
  
  
 0.906
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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