Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| coaA | dgk | stu0799 | stu0618 | Pantothenate kinase. | Diacylglycerol kinase. | 0.607 |
| coaA | eetB | stu0799 | stu0650 | Pantothenate kinase. | Exfoliative exotoxin B, putative. | 0.575 |
| coaA | idi | stu0799 | stu0562 | Pantothenate kinase. | Isopentenyl diphosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.620 |
| coaA | rplC | stu0799 | stu1934 | Pantothenate kinase. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.571 |
| dgk | coaA | stu0618 | stu0799 | Diacylglycerol kinase. | Pantothenate kinase. | 0.607 |
| dgk | eetB | stu0618 | stu0650 | Diacylglycerol kinase. | Exfoliative exotoxin B, putative. | 0.622 |
| dgk | idi | stu0618 | stu0562 | Diacylglycerol kinase. | Isopentenyl diphosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.585 |
| dgk | rplC | stu0618 | stu1934 | Diacylglycerol kinase. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.617 |
| eetB | coaA | stu0650 | stu0799 | Exfoliative exotoxin B, putative. | Pantothenate kinase. | 0.575 |
| eetB | dgk | stu0650 | stu0618 | Exfoliative exotoxin B, putative. | Diacylglycerol kinase. | 0.622 |
| eetB | idi | stu0650 | stu0562 | Exfoliative exotoxin B, putative. | Isopentenyl diphosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.571 |
| eetB | rplC | stu0650 | stu1934 | Exfoliative exotoxin B, putative. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.579 |
| idi | coaA | stu0562 | stu0799 | Isopentenyl diphosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Pantothenate kinase. | 0.620 |
| idi | dgk | stu0562 | stu0618 | Isopentenyl diphosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Diacylglycerol kinase. | 0.585 |
| idi | eetB | stu0562 | stu0650 | Isopentenyl diphosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Exfoliative exotoxin B, putative. | 0.571 |
| idi | ispA | stu0562 | stu1216 | Isopentenyl diphosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Geranyltranstransferase, farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.937 |
| idi | mvaA | stu0562 | stu0576 | Isopentenyl diphosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | 0.825 |
| idi | mvaD | stu0562 | stu0560 | Isopentenyl diphosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Mevalonate pyrophosphate decarboxylase. | 0.992 |
| idi | mvaK1 | stu0562 | stu0559 | Isopentenyl diphosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Mevalonate kinase. | 0.934 |
| idi | mvaK2 | stu0562 | stu0561 | Isopentenyl diphosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Phosphomevalonate kinase. | 0.915 |
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