Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
stu0716Conserved hypothetical, predicted membrane protein (TMS4). (157 aa)    
Predicted Functional Partners:
stu0717
Conserved hypothetical protein.
 
     0.963
stu0311
ABC transporter membrane-spanning protein, truncated; Truncated.
  
 
 0.637
ecfT
ABC transporter membrane-spanning protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. Expression of the complex plus RibU in de- energized E.coli allows riboflavin uptake.
  
 
 0.637
stu0171
Oligopeptide ABC uptake transporter membrane-spanning protein, truncated; Truncated.
  
 
 0.597
amiC
Oligopeptide ABC uptake transporter membrane-binding protein.
  
 
 0.597
ppc
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
       0.594
stu0172
Oligopeptide ABC uptake transporter membrane-spanning protein, truncated; Truncated.
  
 
 0.553
stu0173
Oligopeptide ABC uptake transporter membrane-spanning protein, truncated; Truncated.
  
 
 0.553
amiD
Oligopeptide ABC uptake transporter membrane-binding protein.
  
 
 0.553
stu0289
ABC transporter membrane-spanning protein.
  
 
 0.550
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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