Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| add | apbE | stu0750 | stu0747 | Adenosine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily. | Lipoprotein involved thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.423 |
| add | stu0748 | stu0750 | stu0748 | Adenosine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily. | Conserved hypothetical protein, DHH subfamily. | 0.468 |
| add | stu0749 | stu0750 | stu0749 | Adenosine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily. | Glutathione S-transferase family. | 0.588 |
| apbE | add | stu0747 | stu0750 | Lipoprotein involved thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Adenosine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily. | 0.423 |
| apbE | pncB | stu0747 | stu0226 | Lipoprotein involved thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Nicotinate phosphoribosyltransferase, putative; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | 0.724 |
| apbE | rpmE | stu0747 | stu0746 | Lipoprotein involved thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 50S ribosomal protein L31. | 0.626 |
| apbE | stu0700 | stu0747 | stu0700 | Lipoprotein involved thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Hypothetical protein. | 0.452 |
| apbE | stu0748 | stu0747 | stu0748 | Lipoprotein involved thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Conserved hypothetical protein, DHH subfamily. | 0.800 |
| apbE | stu0749 | stu0747 | stu0749 | Lipoprotein involved thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Glutathione S-transferase family. | 0.609 |
| apbE | stu1825 | stu0747 | stu1825 | Lipoprotein involved thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Oxidoreductase, putative, truncated; Truncated. | 0.623 |
| apbE | stu1826 | stu0747 | stu1826 | Lipoprotein involved thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Oxidoreductase, putative, truncated; Truncated. | 0.693 |
| apbE | stu1827 | stu0747 | stu1827 | Lipoprotein involved thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Oxidoreductase, putative, truncated; Truncated. | 0.847 |
| apbE | stu1828 | stu0747 | stu1828 | Lipoprotein involved thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Oxidoreductase, putative, truncated; Truncated. | 0.742 |
| pncB | apbE | stu0226 | stu0747 | Nicotinate phosphoribosyltransferase, putative; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | Lipoprotein involved thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.724 |
| pncB | stu1827 | stu0226 | stu1827 | Nicotinate phosphoribosyltransferase, putative; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | Oxidoreductase, putative, truncated; Truncated. | 0.478 |
| rpmE | apbE | stu0746 | stu0747 | 50S ribosomal protein L31. | Lipoprotein involved thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.626 |
| rpmE | stu0748 | stu0746 | stu0748 | 50S ribosomal protein L31. | Conserved hypothetical protein, DHH subfamily. | 0.626 |
| rpmE | stu0749 | stu0746 | stu0749 | 50S ribosomal protein L31. | Glutathione S-transferase family. | 0.494 |
| stu0700 | apbE | stu0700 | stu0747 | Hypothetical protein. | Lipoprotein involved thiamine biosynthesis; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.452 |
| stu0700 | stu1827 | stu0700 | stu1827 | Hypothetical protein. | Oxidoreductase, putative, truncated; Truncated. | 0.492 |
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