STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stu0812Conserved hypothetical protein, metallo-beta-lactamase superfamily. (211 aa)    
Predicted Functional Partners:
gloA
Glyoxalase I/lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
    
 0.913
nox
NADH oxidase (H2O-forming).
  
 0.833
stu0907
Hypothetical protein.
  
 
 0.697
pps
Non-ribosomal peptide synthetase.
  
 
 0.648
stu0813
ATP-dependent DNA helicase, truncated; Truncated.
       0.648
ybeY
Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
 
 0.613
truA
tRNA pseudouridine synthase A (pseudouridylate synthase I); Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.592
stu1276
Conserved hypothetical protein.
    
 0.562
mraW
S-adenosylmethionine-dependent methyltransferase, putative; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
   0.562
stu0814
ATP-dependent DNA helicase, truncated; Truncated.
       0.548
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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