Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
stu0875Polar amino acid ABC uptake transporter membrane-spanning protein. (213 aa)    
Predicted Functional Partners:
stu0877
Polar amino acid ABC uptake transporter substrate binding protein.
 
 0.998
stu0876
Polar amino acid ABC uptake transporter ATP-binding protein.
 0.996
stu1492
Polar amino acid ABC uptake transporter substrate binding protein.
 
 0.991
stu1494
Polar amino acid ABC uptake transporter substrate binding protein.
 
 0.980
stu0158
Polar amino acid ABC uptake transporter ATP-binding protein.
 
 0.952
gnlQ
Glutamine ABC uptake transporter ATP-binding protein.
 
 0.910
stu0606
Polar amino acid ABC uptake transporter ATP-binding protein.
 
 0.902
stu1580
Polar amino acid ABC uptake transporter ATP-binding protein.
 
 0.889
stu1495
Polar amino acid ABC uptake transporter substrate binding protein.
 
 0.884
stu1161
Polar amino acid ABC uptake transporter ATP-binding protein.
 
 0.875
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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