Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
stu0882Alcohol dehydrogenase I, truncated; Truncated. (162 aa)    
Predicted Functional Partners:
stu0880
Alcohol dehydrogenase I, truncated; Truncated.
     0.988
stu1882
Alcohol-acetaldehyde dehydrogenase, truncated; Truncated.
  
 0.960
stu1881
Alcohol-acetaldehyde dehydrogenase, truncated; Truncated.
  
 0.942
stu1884
Alcohol-acetaldehyde dehydrogenase, truncated; Truncated.
  
 0.917
stu0881
Alcohol dehydrogenase I, truncated; Truncated.
 
     0.910
stu1883
Alcohol-acetaldehyde dehydrogenase, truncated; Truncated.
  
 
 0.619
stu1879
Alcohol-acetaldehyde dehydrogenase, truncated; Truncated.
  
 
 0.446
stu1880
Alcohol-acetaldehyde dehydrogenase, truncated; Truncated.
  
 
 0.446
leuC
3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
    
 
 0.424
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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