Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aldB | als | stu0924 | stu0923 | Alpha-acetolactate decarboxylase. | Acetolactate synthase; Belongs to the TPP enzyme family. | 0.996 |
aldB | stu0922 | stu0924 | stu0922 | Alpha-acetolactate decarboxylase. | Unknown, predicted membrane protein (TMS11). | 0.404 |
als | aldB | stu0923 | stu0924 | Acetolactate synthase; Belongs to the TPP enzyme family. | Alpha-acetolactate decarboxylase. | 0.996 |
als | speB | stu0923 | stu0921 | Acetolactate synthase; Belongs to the TPP enzyme family. | Agmatinase (arginase family), putative; Belongs to the arginase family. | 0.473 |
als | stu0922 | stu0923 | stu0922 | Acetolactate synthase; Belongs to the TPP enzyme family. | Unknown, predicted membrane protein (TMS11). | 0.434 |
speB | als | stu0921 | stu0923 | Agmatinase (arginase family), putative; Belongs to the arginase family. | Acetolactate synthase; Belongs to the TPP enzyme family. | 0.473 |
speB | stu0920 | stu0921 | stu0920 | Agmatinase (arginase family), putative; Belongs to the arginase family. | Metallo cofactor biosynthesis protein (moaA / nifB / pqqE family). | 0.815 |
speB | stu0922 | stu0921 | stu0922 | Agmatinase (arginase family), putative; Belongs to the arginase family. | Unknown, predicted membrane protein (TMS11). | 0.672 |
stu0920 | speB | stu0920 | stu0921 | Metallo cofactor biosynthesis protein (moaA / nifB / pqqE family). | Agmatinase (arginase family), putative; Belongs to the arginase family. | 0.815 |
stu0920 | stu0922 | stu0920 | stu0922 | Metallo cofactor biosynthesis protein (moaA / nifB / pqqE family). | Unknown, predicted membrane protein (TMS11). | 0.687 |
stu0922 | aldB | stu0922 | stu0924 | Unknown, predicted membrane protein (TMS11). | Alpha-acetolactate decarboxylase. | 0.404 |
stu0922 | als | stu0922 | stu0923 | Unknown, predicted membrane protein (TMS11). | Acetolactate synthase; Belongs to the TPP enzyme family. | 0.434 |
stu0922 | speB | stu0922 | stu0921 | Unknown, predicted membrane protein (TMS11). | Agmatinase (arginase family), putative; Belongs to the arginase family. | 0.672 |
stu0922 | stu0920 | stu0922 | stu0920 | Unknown, predicted membrane protein (TMS11). | Metallo cofactor biosynthesis protein (moaA / nifB / pqqE family). | 0.687 |