STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stu1044Positive transcriptional regulator MutR family. (284 aa)    
Predicted Functional Partners:
stu1511
Positive transcriptional regulator MutR family.
  
     0.734
stu0294
drug:H+ antiporter-3 (DHA3) family protein.
 
     0.692
stu1602
Conserved hypothetical protein.
  
     0.616
stu0700
Hypothetical protein.
  
    0.602
cbpD1
Cell wall protein precursor, similar to choline binding protein.
  
     0.568
rgpF
Polysaccharide biosynthesis protein.
  
     0.505
stu0009
Conserved hypothetical protein.
  
     0.453
tyrSE
tyrosyl-tRNA synthetase E; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
       0.452
stu1816
Oligopeptide ABC uptake transporter substrate-binding protein, truncated; Truncated.
  
     0.449
stu1321
Conserved hypothetical protein, truncated; Truncated.
  
     0.442
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.