Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| argD | pepV | stu0467 | stu1127 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | Dipeptidase. | 0.915 |
| hipO3 | pepV | stu1838 | stu1127 | aminoacylase/N-acyl-L-amino acid amidohydrolase/hippurate hydrolase; Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate. | Dipeptidase. | 0.903 |
| pepM | pepN | stu1557 | stu1007 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Lysyl-aminopeptidase, aminopeptidase N. | 0.851 |
| pepM | pepO | stu1557 | stu1885 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Endopeptidase O. | 0.705 |
| pepM | pepP | stu1557 | stu1742 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Aminopeptidase P; XAA-pro aminopeptidase; Belongs to the peptidase M24B family. | 0.807 |
| pepM | pepQ | stu1557 | stu0629 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Dipeptidase; Belongs to the peptidase M24B family. | 0.807 |
| pepM | pepT | stu1557 | stu1139 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Tripeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.812 |
| pepM | pepV | stu1557 | stu1127 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Dipeptidase. | 0.778 |
| pepM | pepXP | stu1557 | stu1672 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | X-prolyl dipeptidyl peptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family. | 0.768 |
| pepN | pepM | stu1007 | stu1557 | Lysyl-aminopeptidase, aminopeptidase N. | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.851 |
| pepN | pepO | stu1007 | stu1885 | Lysyl-aminopeptidase, aminopeptidase N. | Endopeptidase O. | 0.886 |
| pepN | pepP | stu1007 | stu1742 | Lysyl-aminopeptidase, aminopeptidase N. | Aminopeptidase P; XAA-pro aminopeptidase; Belongs to the peptidase M24B family. | 0.849 |
| pepN | pepQ | stu1007 | stu0629 | Lysyl-aminopeptidase, aminopeptidase N. | Dipeptidase; Belongs to the peptidase M24B family. | 0.826 |
| pepN | pepT | stu1007 | stu1139 | Lysyl-aminopeptidase, aminopeptidase N. | Tripeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.827 |
| pepN | pepV | stu1007 | stu1127 | Lysyl-aminopeptidase, aminopeptidase N. | Dipeptidase. | 0.808 |
| pepN | pepXP | stu1007 | stu1672 | Lysyl-aminopeptidase, aminopeptidase N. | X-prolyl dipeptidyl peptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family. | 0.923 |
| pepO | pepM | stu1885 | stu1557 | Endopeptidase O. | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.705 |
| pepO | pepN | stu1885 | stu1007 | Endopeptidase O. | Lysyl-aminopeptidase, aminopeptidase N. | 0.886 |
| pepO | pepP | stu1885 | stu1742 | Endopeptidase O. | Aminopeptidase P; XAA-pro aminopeptidase; Belongs to the peptidase M24B family. | 0.794 |
| pepO | pepQ | stu1885 | stu0629 | Endopeptidase O. | Dipeptidase; Belongs to the peptidase M24B family. | 0.811 |
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