Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cinA | comEA | stu0059 | stu1562 | Competence/damage inducible protein; Belongs to the CinA family. | Late competence protein required for DNA binding and uptake. | 0.766 |
| cinA | comEC | stu0059 | stu1561 | Competence/damage inducible protein; Belongs to the CinA family. | Late competence protein required for DNA uptake. | 0.900 |
| cinA | endA | stu0059 | stu1165 | Competence/damage inducible protein; Belongs to the CinA family. | Competence associated membrane nuclease. | 0.714 |
| cinA | radC | stu0059 | stu1465 | Competence/damage inducible protein; Belongs to the CinA family. | DNA repair protein; Belongs to the UPF0758 family. | 0.868 |
| comEA | cinA | stu1562 | stu0059 | Late competence protein required for DNA binding and uptake. | Competence/damage inducible protein; Belongs to the CinA family. | 0.766 |
| comEA | comEC | stu1562 | stu1561 | Late competence protein required for DNA binding and uptake. | Late competence protein required for DNA uptake. | 0.982 |
| comEA | endA | stu1562 | stu1165 | Late competence protein required for DNA binding and uptake. | Competence associated membrane nuclease. | 0.609 |
| comEA | radC | stu1562 | stu1465 | Late competence protein required for DNA binding and uptake. | DNA repair protein; Belongs to the UPF0758 family. | 0.624 |
| comEC | cinA | stu1561 | stu0059 | Late competence protein required for DNA uptake. | Competence/damage inducible protein; Belongs to the CinA family. | 0.900 |
| comEC | comEA | stu1561 | stu1562 | Late competence protein required for DNA uptake. | Late competence protein required for DNA binding and uptake. | 0.982 |
| comEC | endA | stu1561 | stu1165 | Late competence protein required for DNA uptake. | Competence associated membrane nuclease. | 0.693 |
| comEC | radC | stu1561 | stu1465 | Late competence protein required for DNA uptake. | DNA repair protein; Belongs to the UPF0758 family. | 0.762 |
| endA | cinA | stu1165 | stu0059 | Competence associated membrane nuclease. | Competence/damage inducible protein; Belongs to the CinA family. | 0.714 |
| endA | comEA | stu1165 | stu1562 | Competence associated membrane nuclease. | Late competence protein required for DNA binding and uptake. | 0.609 |
| endA | comEC | stu1165 | stu1561 | Competence associated membrane nuclease. | Late competence protein required for DNA uptake. | 0.693 |
| endA | epuA | stu1165 | stu1166 | Competence associated membrane nuclease. | Conserved hypothetical protein, competence associated. | 0.641 |
| endA | murA | stu1165 | stu1167 | Competence associated membrane nuclease. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.641 |
| endA | radC | stu1165 | stu1465 | Competence associated membrane nuclease. | DNA repair protein; Belongs to the UPF0758 family. | 0.616 |
| endA | sipB | stu1165 | stu1140 | Competence associated membrane nuclease. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.632 |
| endA | stu0595 | stu1165 | stu0595 | Competence associated membrane nuclease. | Unknown protein. | 0.745 |
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