Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroH | fld | stu1181 | stu1183 | Chorismate mutase. | Flavodoxin. | 0.526 |
| aroH | stu1180 | stu1181 | stu1180 | Chorismate mutase. | Chloride channel (CIC) family protein. | 0.818 |
| aroH | stu1182 | stu1181 | stu1182 | Chorismate mutase. | Chloride channel. | 0.610 |
| fld | aroH | stu1183 | stu1181 | Flavodoxin. | Chorismate mutase. | 0.526 |
| fld | mur2 | stu1183 | stu0869 | Flavodoxin. | Peptidoglycan hydrolase. | 0.513 |
| fld | rpoE | stu1183 | stu0133 | Flavodoxin. | DNA-directed RNA polymerase delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.614 |
| fld | stu0316 | stu1183 | stu0316 | Flavodoxin. | Conserved hypothetical protein. | 0.542 |
| fld | stu0815 | stu1183 | stu0815 | Flavodoxin. | Hypothetical protein. | 0.487 |
| fld | stu1180 | stu1183 | stu1180 | Flavodoxin. | Chloride channel (CIC) family protein. | 0.526 |
| fld | stu1182 | stu1183 | stu1182 | Flavodoxin. | Chloride channel. | 0.637 |
| fld | stu1462 | stu1183 | stu1462 | Flavodoxin. | Conserved hypothetical protein. | 0.511 |
| fld | stu1750 | stu1183 | stu1750 | Flavodoxin. | Conserved hypothetical, predicted membrane protein (TMS4). | 0.529 |
| fld | yajC | stu1183 | stu0196 | Flavodoxin. | Preprotein translocase, YajC subunit, putative. | 0.621 |
| mur2 | fld | stu0869 | stu1183 | Peptidoglycan hydrolase. | Flavodoxin. | 0.513 |
| mur2 | stu0316 | stu0869 | stu0316 | Peptidoglycan hydrolase. | Conserved hypothetical protein. | 0.518 |
| mur2 | stu1750 | stu0869 | stu1750 | Peptidoglycan hydrolase. | Conserved hypothetical, predicted membrane protein (TMS4). | 0.617 |
| mur2 | yajC | stu0869 | stu0196 | Peptidoglycan hydrolase. | Preprotein translocase, YajC subunit, putative. | 0.490 |
| rpoE | fld | stu0133 | stu1183 | DNA-directed RNA polymerase delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | Flavodoxin. | 0.614 |
| rpoE | stu0316 | stu0133 | stu0316 | DNA-directed RNA polymerase delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | Conserved hypothetical protein. | 0.731 |
| rpoE | stu1462 | stu0133 | stu1462 | DNA-directed RNA polymerase delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | Conserved hypothetical protein. | 0.705 |
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