Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
stu1245Oxidoreductase, DadA family protein/D-amino acid oxidase. (367 aa)    
Predicted Functional Partners:
nox
NADH oxidase (H2O-forming).
  
 
 0.824
rmlC
dTDP-4-keto-L-rhamnose reductase.
       0.661
rmlA
Glucose-1-phosphate thymidyl transferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
       0.661
stu1246
Conserved hypothetical protein, truncated; Truncated.
  
    0.646
stu1247
Conserved hypothetical protein, truncated; Truncated.
  
    0.646
stu1248
Conserved hypothetical protein.
       0.620
stu1249
Conserved hypothetical protein.
       0.620
stu2005
Conserved hypothetical protein.
  
     0.619
stu1645
rRNA methylase (SAM-dependent methyltransferase superfamily), putative.
  
  
 0.571
dnaD
DNA replication protein dnaD.
 
     0.561
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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