STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stu1245Oxidoreductase, DadA family protein/D-amino acid oxidase. (367 aa)    
Predicted Functional Partners:
nox
NADH oxidase (H2O-forming).
  
 
 0.897
stu1246
Conserved hypothetical protein, truncated; Truncated.
  
    0.634
stu1247
Conserved hypothetical protein, truncated; Truncated.
  
    0.634
stu2005
Conserved hypothetical protein.
  
     0.619
stu1645
rRNA methylase (SAM-dependent methyltransferase superfamily), putative.
  
  
 0.580
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.532
rmlC
dTDP-4-keto-L-rhamnose reductase.
       0.498
rmlA
Glucose-1-phosphate thymidyl transferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
       0.498
stu1664
Hypothetical, predicted membrane protein (TMS5).
 
    0.496
thiD
Phosphomethylpyrimidine kinase.
  
  
 0.473
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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