STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rr07Response regulator (homolog to RR01Spn & Sth). (226 aa)    
Predicted Functional Partners:
hk07
Sensor histidine kinase (homolog to HK01Spn & Sth).
 
 0.983
stu1333
Peptide-4 ABC exporter (Pep4E) family, substrate binding/membrane-spanning protein.
 
  
 0.871
rr06
Response regulator (homolog to RR11 Spn).
 
 
 0.859
hk04
Sensor histidine kinase (homolog to spaK Bsu).
 
 
 0.849
hk01
Sensor histidine kinase (homolog to csrS/covS Spy).
 
 0.843
hk05
Sensor histidine kinase (homolog to HK02/MicB Spn & HK02 Sth & VicK Spy).
 
 0.838
stu1334
Peptide-4 ABC exporter (Pep4E) family, ATP binding protein.
 
   
 0.836
stu0795
Sensor histidine kinase (homolog to ciaH Spn), truncated; Truncated.
 
 
 0.824
rgpF
Polysaccharide biosynthesis protein.
      
 0.760
rgpA
Polysaccharide biosynthesis protein/putative rhamnosyl transferase.
      
 0.760
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.