STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stu1366Conserved hypothetical protein, Rrf2 family protein. (149 aa)    
Predicted Functional Partners:
nifU
Conserved hypothetical protein, NifU family protein.
  
  
 0.669
nifS2
Aminotransferase (class V), putative.
  
  
 0.630
nifS3
Aminotransferase (class V), putative.
  
  
 0.630
stu1367
Conserved hypothetical protein.
 
     0.527
stu1365
Conserved hypothetical protein, truncated; Truncated.
       0.514
stu1996
Conserved hypothetical, predicted membrane protein (TMS3).
  
     0.474
celB
Similar to cellobiose PTS system component IIC.
       0.466
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.