STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stu1392Glycosyl transferase. (697 aa)    
Predicted Functional Partners:
rgpE
Polysaccharide biosynthesis protein/putative glycosyltransferase.
 
  
 0.743
eps10
Exopolysaccharide biosynthesis protein, glycosyltransferase.
  
 0.737
rgpB
Polysaccharide biosynthesis protein/putative rhamnosyl transferase.
 
  
 0.692
eps12
Exopolysaccharide biosynthesis protein, predicted membrane protein.
 
  
 0.643
rmlB
dTDP-glucose-4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.540
rmlA
Glucose-1-phosphate thymidyl transferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.535
rgpX3
Polysaccharide biosynthesis protein, putative transporter.
  
  
 0.530
stu1106
Exopolysaccharide biosynthesis protein, truncated; Truncated.
 
  
 0.506
epsD
Exopolysaccharide exporter accessory protein.
 
  
 0.504
epsE
Exopolysaccharide biosynthesis protein, glycosyl-1-phosphate transferase.
 
  
 0.503
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.