Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| acoB | acoL | stu1050 | stu1048 | Acetoin dehydrogenase complex, E1 component, beta subunit. | Acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase. | 0.999 |
| acoB | pppL | stu1050 | stu1426 | Acetoin dehydrogenase complex, E1 component, beta subunit. | Phosphoprotein phosphatase. | 0.633 |
| acoL | acoB | stu1048 | stu1050 | Acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase. | Acetoin dehydrogenase complex, E1 component, beta subunit. | 0.999 |
| acoL | dnaJ | stu1048 | stu0121 | Acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase. | Heat shock protein, chaperonin; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between [...] | 0.459 |
| acoL | pppL | stu1048 | stu1426 | Acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase. | Phosphoprotein phosphatase. | 0.910 |
| dnaJ | acoL | stu0121 | stu1048 | Heat shock protein, chaperonin; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between [...] | Acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase. | 0.459 |
| dnaJ | gla | stu0121 | stu1671 | Heat shock protein, chaperonin; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between [...] | Glycerol facilitator; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.691 |
| dnaJ | pplB | stu0121 | stu0627 | Heat shock protein, chaperonin; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between [...] | Peptidyl-prolyl cis-trans isomerase. | 0.829 |
| dnaJ | pppL | stu0121 | stu1426 | Heat shock protein, chaperonin; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between [...] | Phosphoprotein phosphatase. | 0.659 |
| fmt | pknB | stu1428 | stu1425 | Methionyl tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | Protein kinase. | 0.839 |
| fmt | pppL | stu1428 | stu1426 | Methionyl tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | Phosphoprotein phosphatase. | 0.939 |
| fmt | priA | stu1428 | stu1429 | Methionyl tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | Primosomal replication factor Y; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.913 |
| fmt | sunL | stu1428 | stu1427 | Methionyl tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | RNA-binding protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.970 |
| gla | dnaJ | stu1671 | stu0121 | Glycerol facilitator; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Heat shock protein, chaperonin; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between [...] | 0.691 |
| gla | pplB | stu1671 | stu0627 | Glycerol facilitator; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Peptidyl-prolyl cis-trans isomerase. | 0.546 |
| gla | pppL | stu1671 | stu1426 | Glycerol facilitator; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Phosphoprotein phosphatase. | 0.691 |
| pknB | fmt | stu1425 | stu1428 | Protein kinase. | Methionyl tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.839 |
| pknB | pplB | stu1425 | stu0627 | Protein kinase. | Peptidyl-prolyl cis-trans isomerase. | 0.421 |
| pknB | pppL | stu1425 | stu1426 | Protein kinase. | Phosphoprotein phosphatase. | 0.999 |
| pknB | priA | stu1425 | stu1429 | Protein kinase. | Primosomal replication factor Y; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.790 |
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