STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amiEOligopeptide ABC uptake transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (361 aa)    
Predicted Functional Partners:
amiC
Oligopeptide ABC uptake transporter membrane-binding protein.
 
 0.998
amiD
Oligopeptide ABC uptake transporter membrane-binding protein.
 
 0.995
amiA3
Oligopeptide ABC uptake transporter substrate-binding protein.
 
 
 0.986
amiF1
Oligopeptide ABC uptake transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
0.980
stu0173
Oligopeptide ABC uptake transporter membrane-spanning protein, truncated; Truncated.
 
 
 0.971
stu0172
Oligopeptide ABC uptake transporter membrane-spanning protein, truncated; Truncated.
 
 
 0.970
amiA2
Oligopeptide ABC uptake transporter substrate-binding protein.
 
  
 0.937
stu0171
Oligopeptide ABC uptake transporter membrane-spanning protein, truncated; Truncated.
 
 0.929
stu0170
Oligopeptide ABC uptake transporter substrate binding protein, truncated; Truncated.
 
 
 0.926
optF
Oligopeptide ABC uptake transporter membrane-spanning protein; Belongs to the ABC transporter superfamily.
 
 
0.916
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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