Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
stu1452IS861, transposase (orf2), IS3 family, truncated; Truncated. (64 aa)    
Predicted Functional Partners:
stu1451
IS861, transposase (orf2), IS3 family, truncated; Truncated.
       0.773
stu1453
IS861, transposase (orf1), IS3 family, truncated; Truncated.
       0.773
stu0766
IS861, transposase (orf2), IS3 family, truncated; Truncated.
  
     0.748
stu0068
ISSpn1, transposase, IS3 family, truncated; Truncated.
  
     0.707
stu0205
IS861, transposase (orf1), IS3 family, truncated; Truncated.
 
    0.627
stu1454
IS861, transposase (orf1), IS3 family, truncated; Truncated.
  
    0.544
stu1446
IS861, transposase (orf2), IS3 family, truncated; Truncated.
  
     0.516
stu0036
IS861, transposase (orf1), IS3 family, truncated; Truncated.
 
    0.482
pta
Phosphotransacetylase.
       0.474
stu1456
Ribosomal large subunit pseudouridine synthase, RluD subfamily; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.462
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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