Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| folE | ndk | stu1544 | stu0906 | GTP cyclohydrolase I. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.848 |
| folE | nrdD | stu1544 | stu1963 | GTP cyclohydrolase I. | Anaerobic ribonucleoside-triphosphate reductase. | 0.800 |
| folE | pyk | stu1544 | stu1196 | GTP cyclohydrolase I. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.809 |
| folE | relA | stu1544 | stu0145 | GTP cyclohydrolase I. | (p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.800 |
| folE | stu1289 | stu1544 | stu1289 | GTP cyclohydrolase I. | Conserved hypothetical protein. | 0.800 |
| folE | stu1459 | stu1544 | stu1459 | GTP cyclohydrolase I. | GTP pyrophosphokinase, putative. | 0.800 |
| ndk | folE | stu0906 | stu1544 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | GTP cyclohydrolase I. | 0.848 |
| ndk | nrdD | stu0906 | stu1963 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Anaerobic ribonucleoside-triphosphate reductase. | 0.909 |
| ndk | pyk | stu0906 | stu1196 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.911 |
| ndk | relA | stu0906 | stu0145 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | (p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.917 |
| ndk | stu1289 | stu0906 | stu1289 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Conserved hypothetical protein. | 0.909 |
| ndk | stu1459 | stu0906 | stu1459 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | GTP pyrophosphokinase, putative. | 0.900 |
| nrdD | folE | stu1963 | stu1544 | Anaerobic ribonucleoside-triphosphate reductase. | GTP cyclohydrolase I. | 0.800 |
| nrdD | ndk | stu1963 | stu0906 | Anaerobic ribonucleoside-triphosphate reductase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.909 |
| nrdD | pyk | stu1963 | stu1196 | Anaerobic ribonucleoside-triphosphate reductase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.900 |
| nrdD | relA | stu1963 | stu0145 | Anaerobic ribonucleoside-triphosphate reductase. | (p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.900 |
| nrdD | stu1289 | stu1963 | stu1289 | Anaerobic ribonucleoside-triphosphate reductase. | Conserved hypothetical protein. | 0.908 |
| nrdD | stu1459 | stu1963 | stu1459 | Anaerobic ribonucleoside-triphosphate reductase. | GTP pyrophosphokinase, putative. | 0.900 |
| ppnK | pta | stu1457 | stu1455 | ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | Phosphotransacetylase. | 0.813 |
| ppnK | stu1456 | stu1457 | stu1456 | ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | Ribosomal large subunit pseudouridine synthase, RluD subfamily; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.819 |
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