STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rgpX3Polysaccharide biosynthesis protein, putative transporter. (424 aa)    
Predicted Functional Partners:
stu1481
Unknown, predicted membrane protein (TMS3).
 
   
 0.944
stu1482
Glycosyltransferase.
 
  
 0.921
rgpX2
Polysaccharide biosynthesis protein, putative rhamnosyl transferase.
       0.780
stu1486
Hypothetical, predicted membrane protein (TMS9).
 
     0.778
rmlC
dTDP-4-keto-L-rhamnose reductase.
 
  
 0.744
rgpC
Polysaccharide ABC exporter membrane-spanning protein.
 
  
 0.742
rgpA
Polysaccharide biosynthesis protein/putative rhamnosyl transferase.
  
  
 0.717
rgpD
Polysaccharide ABC exporter ATP-binding protein.
 
   
 0.715
rmlD
dTDP-4-keto-L-rhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.696
rmlB
dTDP-glucose-4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.694
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.