Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| labT | stu1496 | stu0100 | stu1496 | Bacteriocin exporter, putative. | MutT/nudix family protein. | 0.429 |
| stu0941 | stu1496 | stu0941 | stu1496 | Phosphorylase, Pnp/Udp family. | MutT/nudix family protein. | 0.477 |
| stu1494 | stu1495 | stu1494 | stu1495 | Polar amino acid ABC uptake transporter substrate binding protein. | Polar amino acid ABC uptake transporter substrate binding protein. | 0.977 |
| stu1494 | stu1496 | stu1494 | stu1496 | Polar amino acid ABC uptake transporter substrate binding protein. | MutT/nudix family protein. | 0.444 |
| stu1494 | uvrB | stu1494 | stu1497 | Polar amino acid ABC uptake transporter substrate binding protein. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.400 |
| stu1495 | stu1494 | stu1495 | stu1494 | Polar amino acid ABC uptake transporter substrate binding protein. | Polar amino acid ABC uptake transporter substrate binding protein. | 0.977 |
| stu1495 | stu1496 | stu1495 | stu1496 | Polar amino acid ABC uptake transporter substrate binding protein. | MutT/nudix family protein. | 0.480 |
| stu1495 | uvrB | stu1495 | stu1497 | Polar amino acid ABC uptake transporter substrate binding protein. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.400 |
| stu1496 | labT | stu1496 | stu0100 | MutT/nudix family protein. | Bacteriocin exporter, putative. | 0.429 |
| stu1496 | stu0941 | stu1496 | stu0941 | MutT/nudix family protein. | Phosphorylase, Pnp/Udp family. | 0.477 |
| stu1496 | stu1494 | stu1496 | stu1494 | MutT/nudix family protein. | Polar amino acid ABC uptake transporter substrate binding protein. | 0.444 |
| stu1496 | stu1495 | stu1496 | stu1495 | MutT/nudix family protein. | Polar amino acid ABC uptake transporter substrate binding protein. | 0.480 |
| stu1496 | stu1498 | stu1496 | stu1498 | MutT/nudix family protein. | Unknown protein. | 0.437 |
| stu1496 | uvrB | stu1496 | stu1497 | MutT/nudix family protein. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.697 |
| stu1498 | stu1496 | stu1498 | stu1496 | Unknown protein. | MutT/nudix family protein. | 0.437 |
| stu1498 | uvrB | stu1498 | stu1497 | Unknown protein. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.544 |
| uvrB | stu1494 | stu1497 | stu1494 | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | Polar amino acid ABC uptake transporter substrate binding protein. | 0.400 |
| uvrB | stu1495 | stu1497 | stu1495 | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | Polar amino acid ABC uptake transporter substrate binding protein. | 0.400 |
| uvrB | stu1496 | stu1497 | stu1496 | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | MutT/nudix family protein. | 0.697 |
| uvrB | stu1498 | stu1497 | stu1498 | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | Unknown protein. | 0.544 |