Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
gnlQGlutamine ABC uptake transporter ATP-binding protein. (246 aa)    
Predicted Functional Partners:
gnlP
Glutamine ABC uptake transporter membrane-spanning protein.
 
 0.995
stu0605
Polar amino acid ABC uptake transporter membrane-spanning protein.
 
 0.935
stu1164
Polar amino acid ABC uptake transporter membrane-spanning protein.
 
 
 0.926
stu0875
Polar amino acid ABC uptake transporter membrane-spanning protein.
 
 0.910
stu1653
Polar amino acid ABC uptake transporter membrane-spanning protein.
 
 
 0.895
stu0176
Oligopeptide ABC uptake transporter ATP binding protein, truncated; Truncated.
 
 
   
0.892
stu1163
Polar amino acid ABC uptake transporter membrane-spanning protein.
 
 
 0.888
stu0976
Amino acid ABC uptake transporter membrane-spanning protein, truncated; Truncated.
 
 
 0.885
stu1411
ABC transporter, truncated; Truncated.
 
     
0.874
stu1581
Polar amino acid ABC uptake transporter membrane-spanning protein.
 
 
 0.827
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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