STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comECLate competence protein required for DNA uptake. (746 aa)    
Predicted Functional Partners:
comEA
Late competence protein required for DNA binding and uptake.
 
  
 0.982
comFC
Late competence protein.
 
  
 0.954
dprA
DNA processing protein, Smf family.
 
  
 0.932
comFA
Late competence protein required for DNA uptake.
   
  
 0.910
comGA
Late competence protein, ABC transporter subunit.
 
  
 0.904
cinA
Competence/damage inducible protein; Belongs to the CinA family.
     
 0.900
coiA
Competence protein, transcription factor.
 
  
 0.862
comGB
Late competence protein, ABC transporter subunit.
 
  
 0.842
recA
Recombination protein A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.823
radC
DNA repair protein; Belongs to the UPF0758 family.
  
  
 0.762
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.