STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comEALate competence protein required for DNA binding and uptake. (231 aa)    
Predicted Functional Partners:
comEC
Late competence protein required for DNA uptake.
 
  
 0.982
comFA
Late competence protein required for DNA uptake.
   
  
 0.924
comGA
Late competence protein, ABC transporter subunit.
  
  
 0.922
coiA
Competence protein, transcription factor.
   
  
 0.879
comFC
Late competence protein.
  
  
 0.781
cinA
Competence/damage inducible protein; Belongs to the CinA family.
     
 0.766
dprA
DNA processing protein, Smf family.
  
  
 0.751
comGB
Late competence protein, ABC transporter subunit.
  
  
 0.724
comX
Transcriptional regulator, competence factor,RNA polymerase sigma factor; Belongs to the sigma-70 factor family.
   
  
 0.662
pilD
Prepilin peptidase type IV.
   
  
 0.630
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.