Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| murF | stu1575 | stu1576 | stu1575 | UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-- D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | Conserved hypothetical, predicted membrane protein (TMS7). | 0.598 |
| prfC | stu1575 | stu1574 | stu1575 | Peptide-chain-release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | Conserved hypothetical, predicted membrane protein (TMS7). | 0.467 |
| stu1446 | stu1575 | stu1446 | stu1575 | IS861, transposase (orf2), IS3 family, truncated; Truncated. | Conserved hypothetical, predicted membrane protein (TMS7). | 0.464 |
| stu1565 | stu1575 | stu1565 | stu1575 | Peptidoglycan GlcNAc deacetylase, truncated; Truncated. | Conserved hypothetical, predicted membrane protein (TMS7). | 0.636 |
| stu1575 | murF | stu1575 | stu1576 | Conserved hypothetical, predicted membrane protein (TMS7). | UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-- D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.598 |
| stu1575 | prfC | stu1575 | stu1574 | Conserved hypothetical, predicted membrane protein (TMS7). | Peptide-chain-release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.467 |
| stu1575 | stu1446 | stu1575 | stu1446 | Conserved hypothetical, predicted membrane protein (TMS7). | IS861, transposase (orf2), IS3 family, truncated; Truncated. | 0.464 |
| stu1575 | stu1565 | stu1575 | stu1565 | Conserved hypothetical, predicted membrane protein (TMS7). | Peptidoglycan GlcNAc deacetylase, truncated; Truncated. | 0.636 |