Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
hit | stu1607 | stu1610 | stu1607 | Cell cycle regulation histidine triad (HIT) protein. | Conserved hypothetical protein. | 0.551 |
hit | stu1608 | stu1610 | stu1608 | Cell cycle regulation histidine triad (HIT) protein. | ABC transporter membrane-spanning protein. | 0.646 |
hit | stu1609 | stu1610 | stu1609 | Cell cycle regulation histidine triad (HIT) protein. | ABC transporter ATP binding protein. | 0.574 |
hit | stu1611 | stu1610 | stu1611 | Cell cycle regulation histidine triad (HIT) protein. | Conserved hypothetical protein. | 0.800 |
hit | trmB | stu1610 | stu1606 | Cell cycle regulation histidine triad (HIT) protein. | Conserved hypothetical protein, methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.509 |
stu1607 | hit | stu1607 | stu1610 | Conserved hypothetical protein. | Cell cycle regulation histidine triad (HIT) protein. | 0.551 |
stu1607 | stu1608 | stu1607 | stu1608 | Conserved hypothetical protein. | ABC transporter membrane-spanning protein. | 0.713 |
stu1607 | stu1609 | stu1607 | stu1609 | Conserved hypothetical protein. | ABC transporter ATP binding protein. | 0.617 |
stu1607 | stu1611 | stu1607 | stu1611 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.509 |
stu1607 | trmB | stu1607 | stu1606 | Conserved hypothetical protein. | Conserved hypothetical protein, methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.808 |
stu1608 | hit | stu1608 | stu1610 | ABC transporter membrane-spanning protein. | Cell cycle regulation histidine triad (HIT) protein. | 0.646 |
stu1608 | stu1607 | stu1608 | stu1607 | ABC transporter membrane-spanning protein. | Conserved hypothetical protein. | 0.713 |
stu1608 | stu1609 | stu1608 | stu1609 | ABC transporter membrane-spanning protein. | ABC transporter ATP binding protein. | 0.894 |
stu1608 | stu1611 | stu1608 | stu1611 | ABC transporter membrane-spanning protein. | Conserved hypothetical protein. | 0.609 |
stu1608 | trmB | stu1608 | stu1606 | ABC transporter membrane-spanning protein. | Conserved hypothetical protein, methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.648 |
stu1609 | hit | stu1609 | stu1610 | ABC transporter ATP binding protein. | Cell cycle regulation histidine triad (HIT) protein. | 0.574 |
stu1609 | stu1607 | stu1609 | stu1607 | ABC transporter ATP binding protein. | Conserved hypothetical protein. | 0.617 |
stu1609 | stu1608 | stu1609 | stu1608 | ABC transporter ATP binding protein. | ABC transporter membrane-spanning protein. | 0.894 |
stu1609 | stu1611 | stu1609 | stu1611 | ABC transporter ATP binding protein. | Conserved hypothetical protein. | 0.574 |
stu1609 | trmB | stu1609 | stu1606 | ABC transporter ATP binding protein. | Conserved hypothetical protein, methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.617 |
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