STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stu1815Oligopeptide ABC uptake transporter substrate-binding protein, truncated; Truncated. (157 aa)    
Predicted Functional Partners:
stu1816
Oligopeptide ABC uptake transporter substrate-binding protein, truncated; Truncated.
 
 0.995
amiC
Oligopeptide ABC uptake transporter membrane-binding protein.
 
 
 0.905
amiD
Oligopeptide ABC uptake transporter membrane-binding protein.
 
  
 0.787
amiF1
Oligopeptide ABC uptake transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.724
stu1152
Conserved hypothetical protein, acetyltransferase, truncated; Truncated.
  
     0.692
stu0551
Phosphorylase, Pnp/Udp family, putative.
  
     0.627
stu0171
Oligopeptide ABC uptake transporter membrane-spanning protein, truncated; Truncated.
  
 
 0.599
amiE
Oligopeptide ABC uptake transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.578
stu1447
Oligopeptide ABC uptake transporter ATP-binding protein, truncated; Truncated.
 
 
 0.540
rplA
50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
       0.539
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.