STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stu1836Conserved hypothetical, predicted membrane protein (TMS6). (224 aa)    
Predicted Functional Partners:
stu1837
Conserved hypothetical protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.897
tatA
Sec-independent protein translocase protein tatA, putative.
   
 
 0.737
tnpSth1-10
ISSth1, transposase (orf1), IS3 family.
       0.631
hipO3
aminoacylase/N-acyl-L-amino acid amidohydrolase/hippurate hydrolase; Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate.
  
    0.614
tnpSth1-9
ISSth1, transposase (orf2), IS3 family.
       0.610
stu0459
Cell wall protein precursor, similar to choline binding protein, truncated; Truncated.
  
   0.598
stu1047
Unknown protein.
  
   0.598
dapD
2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.
       0.498
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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