STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stu1860Competence protein, putative. (153 aa)    
Predicted Functional Partners:
stu1861
Conserved hypothetical protein.
  
  
 0.943
comGC
Late competence protein, exogenous DNA-binding protein.
  
  
 0.943
comGB
Late competence protein, ABC transporter subunit.
  
  
 0.941
comGA
Late competence protein, ABC transporter subunit.
  
  
 0.931
stu1859
Hypothetical protein.
       0.800
comGD
Competence protein.
       0.800
stu1858
Conserved hypothetical protein.
       0.677
comEC
Late competence protein required for DNA uptake.
   
  
 0.655
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.617
stu1866
Conserved hypothetical protein.
       0.609
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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