STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stu1861Conserved hypothetical protein. (97 aa)    
Predicted Functional Partners:
comGB
Late competence protein, ABC transporter subunit.
  
  
 0.977
comGA
Late competence protein, ABC transporter subunit.
  
 
 0.968
comGC
Late competence protein, exogenous DNA-binding protein.
  
  
 0.951
stu1860
Competence protein, putative.
  
  
 0.943
comGD
Competence protein.
  
  
 0.834
stu1859
Hypothetical protein.
     
 0.813
comEC
Late competence protein required for DNA uptake.
  
  
 0.695
stu1858
Conserved hypothetical protein.
       0.677
pilD
Prepilin peptidase type IV.
  
  
 0.667
comFA
Late competence protein required for DNA uptake.
   
  
 0.662
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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