Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
stu1949Micrococin J25 ABC exporter (McjD) family, ATP binding/membrane-spanning protein. (522 aa)    
Predicted Functional Partners:
stu1948
Conserved hypothetical protein.
 
    0.810
stu0275
Peptide-2 ABC exporter (Pep2E) family, ATP binding/membrane-spanning protein, truncated; Truncated.
 
 
   0.749
stu1947
Positive transcriptional regulator MutR family.
 
     0.683
stu0546
ABC transporter ATP binding protein.
  
  0.581
stu0928
ABC transporter membrane-spanning protein, truncated; Truncated.
 
 
 
 0.474
stu0184
Conserved hypothetical, predicted membrane protein (TMS10).
  
 
   0.464
stu1713
ABC transporter ATP binding protein, truncated; Truncated.
  
  0.442
stu1714
ABC transporter ATP binding protein, truncated; Truncated.
  
  0.437
stu1609
ABC transporter ATP binding protein.
  
  0.436
dnaK
Heat shock protein, chaperonin; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.413
Your Current Organism:
Streptococcus thermophilus
NCBI taxonomy Id: 264199
Other names: S. thermophilus LMG 18311, Streptococcus thermophilus LMG 18311, Streptococcus thermophilus str. LMG 18311, Streptococcus thermophilus strain LMG 18311
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