STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppaASimilar to F-box protein. (337 aa)    
Predicted Functional Partners:
ppaB
Similar to F-box protein.
 
    
0.811
pc0038
Conserved hypothetical protein.
  
 
  0.733
pc1816
Hypothetical protein.
  
     0.609
pc0264
Hypothetical protein.
  
     0.573
pc1455
Conserved hypothetical protein.
  
     0.571
pc0970
Conserved hypothetical protein.
  
     0.569
pc1341
Conserved hypothetical protein.
  
     0.564
ptc1
Similar to phosphoprotein phosphatase.
  
 
  0.563
pc1481
Hypothetical protein.
  
 
   0.523
pc1449
Hypothetical protein.
  
  0.482
Your Current Organism:
Protochlamydia amoebophila
NCBI taxonomy Id: 264201
Other names: C. Protochlamydia amoebophila UWE25, Candidatus Protochlamydia amoebophila UWE25, Candidatus Protochlamydia amoebophila str. UWE25, Candidatus Protochlamydia amoebophila strain UWE25, Parachlamydia sp. UWE25, Parachlamydia-related symbiont UWE25, endosymbiont of Acanthamoeba sp. UWE25
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