STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pc1443Conserved hypothetical protein. (118 aa)    
Predicted Functional Partners:
pc1442
Conserved hypothetical protein.
 
 
 
 0.966
traG
Similar to conjugative transfer protein traG.
       0.590
traD
Similar to conjugative transfer protein traD.
       0.590
traN
Similar to conjugative transfer protein traN precursor.
       0.578
traF-2
Similar to F pilus assembly protein traF.
       0.578
traH
Similar to F pilus assembly protein traH.
       0.578
pc1444
Unknown protein.
       0.490
pc0990
Conserved hypothetical protein.
   
 
 0.405
Your Current Organism:
Protochlamydia amoebophila
NCBI taxonomy Id: 264201
Other names: C. Protochlamydia amoebophila UWE25, Candidatus Protochlamydia amoebophila UWE25, Candidatus Protochlamydia amoebophila str. UWE25, Candidatus Protochlamydia amoebophila strain UWE25, Parachlamydia sp. UWE25, Parachlamydia-related symbiont UWE25, endosymbiont of Acanthamoeba sp. UWE25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.