STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0001PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bxe:Bxe_C0393 putative TonB-dependent siderophore receptor. (789 aa)    
Predicted Functional Partners:
ZMO0789
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX1017 TonB-dependent outer membrane receptor.
  
    0.748
ZMO0128
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX1017 TonB-dependent outer membrane receptor.
  
    0.746
ZMO0031
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_3048 TonB-dependent receptor.
  
    0.742
ZMO1694
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_4625 TonB-dependent receptor.
  
    0.742
ZMO1260
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdj:Gdia_2919 TonB-dependent receptor.
  
    0.740
ZMO1463
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX1347 TonB-dependent outer membrane receptor.
  
    0.736
ZMO0252
TIGRFAM: major intrinsic protein; KEGG: pin:Ping_2848 hemagglutinin/hemolysin-related protein.
    
 
 0.725
ZMO1568
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX1347 TonB-dependent outer membrane receptor.
  
    0.721
ZMO0002
PFAM: aminotransferase class I and II; KEGG: bra:BRADO4744 putative histidinol-phosphate aminotransferase (HisC-like).
       0.705
ZMO1451
PFAM: purine nucleoside permease; KEGG: ccr:CC_0187 purine nucleoside permease, putative.
  
     0.618
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.