STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0025PFAM: protein of unknown function DUF6 transmembrane; KEGG: swi:Swit_0727 hypothetical protein. (309 aa)    
Predicted Functional Partners:
ZMO1787
KEGG: eli:ELI_14710 hypothetical protein.
      
 0.570
ZMO0023
PFAM: regulatory protein AsnC/Lrp family; regulatory protein MarR; KEGG: swi:Swit_0726 AsnC family transcriptional regulator.
       0.546
ZMO1084
Cellulose synthase subunit B; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
  
   0.529
ZMO1085
KEGG: bph:Bphy_3253 cellulose synthase domain-containing protein; PFAM: cellulose synthase operon C domain protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein.
 
     0.504
ZMO0301
PFAM: PepSY-associated TM helix domain protein; KEGG: cja:CJA_2538 plasmolipin.
  
     0.485
ZMO0026
PFAM: Sel1 domain protein repeat-containing protein; KEGG: aas:Aasi_0854 hypothetical protein.
  
    0.458
ZMO0055
PFAM: protein of unknown function DUF81; KEGG: gdj:Gdia_1361 protein of unknown function DUF81.
      
 0.457
cysC
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
      
 0.453
hcp
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
      
 0.451
ZMO0379
TIGRFAM: phage terminase, large subunit, PBSX family; KEGG: bbt:BBta_5804 putative phage terminase large subunit.
  
     0.432
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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