STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0079PFAM: response regulator receiver; KEGG: cak:Caul_0278 response regulator receiver protein. (121 aa)    
Predicted Functional Partners:
ZMO0083
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: acr:Acry_2708 CheA signal transduction histidine kinase.
 0.999
ZMO0078
PFAM: CheW domain protein; KEGG: acr:Acry_2709 putative CheW protein.
 
 0.994
ZMO0085
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: acr:Acry_2705 methyl-accepting chemotaxis sensory transducer.
 
 0.983
ZMO0202
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: cak:Caul_0276 methyl-accepting chemotaxis sensory transducer.
 
 0.977
ZMO0882
PFAM: chemotaxis sensory transducer; KEGG: nar:Saro_1430 methyl-accepting chemotaxis sensory transducer.
 
 0.971
ZMO0084
KEGG: pzu:PHZ_c3381 CheX protein.
    
  0.942
ZMO0644
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
 
 0.912
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.902
cheD
CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
    0.895
ZMO0880
Putative CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; KEGG: cak:Caul_0279 CheA signal transduction histidine kinase.
 
 0.890
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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