STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0099PFAM: major facilitator superfamily MFS_1; KEGG: sal:Sala_1153 major facilitator transporter. (422 aa)    
Predicted Functional Partners:
ZMO0255
KEGG: abm:ABSDF2316 protein secretion efflux system ABC transporter membrane protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein.
   
 
 0.648
ZMO1111
PFAM: major facilitator superfamily MFS_1; KEGG: aau:AAur_0720 major facilitator transporter.
  
   
 0.625
ZMO0253
KEGG: abb:ABBFA_002303 HAS ABC exporter outer membrane component; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein.
   
  
 0.570
ZMO0214
MATE efflux family protein; KEGG: hch:HCH_00046 Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE.
      
 0.568
ZMO0566
PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_5058 major facilitator transporter.
      
 0.567
ZMO1012
KEGG: swi:Swit_4112 hypothetical protein.
  
     0.510
ZMO2018
PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: rme:Rmet_5002 major facilitator superfamily MFS_1.
  
  
 0.505
ZMO0228
PFAM: polysaccharide biosynthesis protein; KEGG: swi:Swit_0449 polysaccharide biosynthesis protein.
  
     0.485
ZMO1457
PFAM: major facilitator superfamily MFS_1; KEGG: bid:Bind_3390 major facilitator transporter.
   
  
 0.461
ZMO0252
TIGRFAM: major intrinsic protein; KEGG: pin:Ping_2848 hemagglutinin/hemolysin-related protein.
      
 0.459
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.