STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0107KEGG: sal:Sala_2241 hypothetical protein. (269 aa)    
Predicted Functional Partners:
ZMO1390
KEGG: sal:Sala_2173 hypothetical protein.
  
     0.775
ZMO1391
PFAM: diacylglycerol kinase catalytic region; KEGG: swi:Swit_3903 diacylglycerol kinase, catalytic region.
  
     0.772
ZMO1734
KEGG: cak:Caul_2416 hypothetical protein.
 
     0.771
ZMO1777
KEGG: gox:GOX0795 hypothetical protein.
 
     0.752
ZMO1400
KEGG: swi:Swit_3908 hypothetical protein.
  
     0.750
ZMO0704
PFAM: AMP-dependent synthetase and ligase; KEGG: swi:Swit_2559 acyl-CoA synthetase.
  
     0.724
ZMO1443
PFAM: polysaccharide biosynthesis protein; KEGG: gox:GOX0796 hypothetical protein.
 
     0.724
ZMO1316
PFAM: polysaccharide biosynthesis protein; KEGG: ssn:SSON_3221 hypothetical protein.
 
     0.678
ZMO1399
PFAM: fatty acid hydroxylase; KEGG: swi:Swit_3907 fatty acid hydroxylase.
  
     0.671
ZMO0108
PFAM: small multidrug resistance protein; KEGG: bwe:BcerKBAB4_0308 small multidrug resistance protein.
       0.601
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.