STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0164KEGG: swi:Swit_2134 hypothetical protein. (359 aa)    
Predicted Functional Partners:
ZMO0162
Protein TolR; KEGG: sal:Sala_0330 biopolymer transport protein ExbD/TolR; TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR.
  
 
 0.962
ZMO0161
PFAM: MotA/TolQ/ExbB proton channel; KEGG: sal:Sala_0331 MotA/TolQ/ExbB proton channel.
  
 
 0.959
ZMO1040
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX0945 TonB-dependent outer membrane receptor.
  
 
 0.951
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.885
ZMO0979
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_1750 TonB-dependent receptor.
   
 
 0.842
ZMO0160
PFAM: thioesterase superfamily protein; KEGG: eli:ELI_09535 thioesterase.
  
    0.823
ZMO1715
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: swi:Swit_0119 biopolymer transport-like protein.
  
 
 0.801
ZMO2025
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: swi:Swit_0120 biopolymer transport protein ExbD/TolR.
  
 
 0.796
ZMO1716
PFAM: MotA/TolQ/ExbB proton channel; KEGG: swi:Swit_0118 MotA/TolQ/ExbB proton channel.
  
 
 0.790
ZMO0031
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_3048 TonB-dependent receptor.
   
   0.689
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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