STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0169PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xau:Xaut_1054 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (247 aa)    
Predicted Functional Partners:
ZMO0170
KEGG: gdi:GDI3757 putative glycerophosphoryl diester phosphodiesterase.
      
 0.789
ZMO0353
PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; short-chain dehydrogenase/reductase SDR; KEGG: sgr:SGR_4956 putative bifunctional ribulose 5-phosphate reductase/CDP-ribitol pyrophosphorylase.
 
 
   0.616
ZMO1946
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bam:Bamb_6431 short-chain dehydrogenase/reductase SDR.
  
     0.603
ZMO2012
KEGG: swi:Swit_3899 hypothetical protein.
   
  
 0.584
ZMO0133
PFAM: Sel1 domain protein repeat-containing protein; KEGG: aas:Aasi_0854 hypothetical protein.
      
 0.524
ZMO0134
PFAM: Sel1 domain protein repeat-containing protein; KEGG: min:Minf_1656 TPR repeat protein, SEL1 subfamily.
      
 0.524
ZMO0135
PFAM: Sel1 domain protein repeat-containing protein; KEGG: min:Minf_1656 TPR repeat protein, SEL1 subfamily.
      
 0.524
ZMO0136
PFAM: Sel1 domain protein repeat-containing protein; KEGG: min:Minf_1697 TPR repeat protein, SEL1 subfamily.
      
 0.524
ZMO1886
KEGG: bid:Bind_2181 membrane protein AbrB duplication; TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase.
      
 0.524
ZMO0035
PFAM: Ankyrin; KEGG: swi:Swit_2821 ankyrin.
  
 0.520
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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