STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0174SnoaL; KEGG: SnoaL. (130 aa)    
Predicted Functional Partners:
ZMO0916
PFAM: Heavy metal transport/detoxification protein; KEGG: similar to ATPase, Cu++ transporting, beta polypeptide.
      
 0.568
ZMO1378
KEGG: gbe:GbCGDNIH1_1893 ethanolamine permease; TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region.
      
 0.562
ZMO1437
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pfl:PFL_2679 amino acid transporter LysE.
      
 0.459
ZMO1298
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdj:Gdia_1934 TonB-dependent receptor plug.
      
 0.457
ZMO1548
TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; KEGG: bbt:BBta_1355 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase.
      
 0.457
ZMO0285
KEGG: gdj:Gdia_1996 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein.
      
 0.451
ZMO0173
KEGG: pla:Plav_2110 hypothetical protein.
       0.449
ZMO0175
Hypothetical protein.
       0.439
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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