STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0243PFAM: conserved hypothetical protein; KEGG: swi:Swit_2231 hypothetical protein. (278 aa)    
Predicted Functional Partners:
ZMO1009
PFAM: SapC family protein; KEGG: swi:Swit_0137 SapC family protein.
  
     0.659
ZMO1522
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_3144 TonB-dependent receptor.
  
     0.536
ZMO1563
PFAM: protein of unknown function DUF481; KEGG: swi:Swit_3855 hypothetical protein.
  
     0.483
lptD
Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.449
ZMO0301
PFAM: PepSY-associated TM helix domain protein; KEGG: cja:CJA_2538 plasmolipin.
  
     0.431
ZMO0244
PFAM: histone family protein DNA-binding protein; KEGG: nar:Saro_1217 histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family.
       0.418
ZMO0664
KEGG: swi:Swit_4479 hypothetical protein.
  
     0.406
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.