STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMO0293TIGRFAM: sugar transporter; KEGG: bch:Bcen2424_4639 sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (480 aa)    
Predicted Functional Partners:
purM
TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: sal:Sala_1757 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein.
 
      0.571
ZMO0637
SMART: AAA ATPase; TIGRFAM: ATPase, FliI/YscN family; KEGG: swi:Swit_1290 FliI/YscN family ATPase; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region.
      
 0.565
ZMO1452
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: gdj:Gdia_0635 major facilitator superfamily MFS_1.
      
 0.565
purD
TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: nar:Saro_0172 phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; ATP-grasp domain protein.
 
      0.551
ZMO0910
KEGG: swi:Swit_3493 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
      
 0.547
ZMO1018
PFAM: protein of unknown function DUF140; KEGG: swi:Swit_2742 hypothetical protein.
      
 0.547
ZMO0252
TIGRFAM: major intrinsic protein; KEGG: pin:Ping_2848 hemagglutinin/hemolysin-related protein.
      
 0.457
ZMO0254
TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; KEGG: ece:Z0634 putative cytoplasmic membrane export protein; SMART: AAA ATPase.
      
 0.457
glf
Sugar transporter; Allows uptake of glucose by the cell; allows growth on glucose minimal medium by E.coli cells impaired in glucose transport. Also transports fructose, but has a strong preference for glucose.
  
   
0.445
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
    0.422
Your Current Organism:
Zymomonas mobilis ZM4
NCBI taxonomy Id: 264203
Other names: Z. mobilis subsp. mobilis ZM4 = ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821, Zymomonas mobilis subsp. mobilis ATCC 31821 = ZM4, Zymomonas mobilis subsp. mobilis ZM4, Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
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